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MT3DMS file saving issue


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Has anyone had an issue saving and running multiple MT3DMS sims inside one gpr file by unchecking the default "save all files in subfolders" and instead assigning a unique *.mts name to each sim? When I close out and reopen the gpr sometimes the MT3DMS solutions all look the same, so maybe I am getting some solution file overwriting. I have checked the directory and all the input & output files are there with different time stamps and the mts file lists the input files correctly.

I don't see why this wont work but any insight on the pitfalls of this method or specific instructions are welcome.

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